White Papers

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WebMetaBase: Metpathway kinetics

Metabolic pathway kinetics uses the chemical kinetic theory, and a metabolic pathway drawn in WebMetabase, to fit the equation of expected mass spectrometer integrated signal area vs. time to the experimental values observed. The quality of this fitting can be used to assess the metabolic pathway quality, and can be used to guide changes of the metabolic pathway.

Published Jan. 26, 2018

WebMetaBase: Fragmentation Pathway

The tool in WebMetabase to draw fragmentation pathways allows the user to automatically build an image of an estimated pathway based on the fragments structures. The user can modify the fragments shown and their relationship and re-draw the pathway, move the nodes to get a better image and finally save and report it.

Published Jan. 12, 2018